YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70997880, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLTSVRAA RTALCSTCRF ACPSTTAGRV TVIARRGLST ATEQAPADVA NKPRWSYTPP  60
   61 SAKAPFSLRF NSKRREYPVN SDPKTLDQFY IRMLGADGDK VLSEEVKWLA VTHKSFDQGR 120
  121 RGFNDRLAFL GKRIVQLQAS LALVQNPGNA SSSTTPDSFG REPFAHPALE GLKNLSASTK 180
  181 SILTSKPKLA ELAQKYELQK VLRWSPRKPN NLASSGIELV LAHTMYAIIG AIALERGGHV 240
  241 ANKVARERVL EPLGLKTTA

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	259	0.97