YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70997695, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGSDIFLGI LAIFFPPVAV WIKVGICTAD SIINLALCCL GYVPGLLHAW YIILKYPEPD  60
   61 YDDPNYEPIP GHAGRRQDTE SGRVTYYYVS HQPIQHPSQR SYGTVTPQNQ PAPSPAPKPQ 120
  121 QQAPKPHHEE GQGGSSDHAQ GDSRPPPTYA EAVKGDHKVQ THD

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.50
Transmembrane Helix	6	25	0.80
Cytoplasmic	26	31	0.36
Transmembrane Helix	32	52	0.77
Non-Cytoplasmic	53	163	0.50