YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66851206, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGPKYMRY LLFAAVGLAV FFLISRSSIP IPENIGSKLS PANYKDTISQ SDKAHNDAPP  60
   61 KPPVKETPGS ANTAPVGRVN ATFVTLARNS DVWDIAKSIR QVEDRFNRNY HYDWVFLNDK 120
  121 PFDDTFKKVT TSLVSGKTFY GEIPKEHWSY PDWIDQEKAK KVREEMGQKK IIYGDSESYR 180
  181 HMCRYESGFF FRHPLMLNYE YYWRVEPSIE LYCDISFDPF KLMKEQNKKY SFVLSLYEYY 240
  241 DTIPSLWDSV KKFMGNHPEH IAEGNAMGFL SDDGGKTYNK CHFWSNFEIG SLEWLRSKQY 300
  301 LDYFDALDHD GGFFYERWGD APVHSIAAGI MLKKEEIHFF NEIAYYHIPF THCPTSEQMR 360
  361 LDLKCHCNPS ENFDWKGYSC TSRWFQINDM EKPEGAEEQS

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	400	0.99