YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66851191, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYGDMAGL HQLPRRADPQ NASNSASSLV STLVPALVVA GIMVLVFVIL RRSERRMYMP  60
   61 RTYLGFLRPE ERSPPVGTGL WNWIIDMYKL PDEYVLQHHS MDAYLLLRFL KLISVICFVG 120
  121 CLITWPILFP VNATGGAHKE QLDILTMSNI AQDNNARYYA HAFVAWIFVG FVFMTVTREG 180
  181 IFYINLRQAY SLSPAYASRL SSRTVLFTAV TDDYLNRDKI RKMFGIEKVK NVWIATDVKE 240
  241 LEDKVKERDA AAMKLEAAET KLIKLANAAR AKAMKKEGNA EDDAVPLENL SDEPDDESGS 300
  301 VAARWVKPSE RPTHRLKFLI GKKVDTINWA RSEIERLSPE IEELQAKHRA GDAKLVSSVF 360
  361 VEFYTQADAQ LAFQSVAHNL PLHMAPRYIG LDPTQVIWSN LRIKWWERII RYSATIGLVC 420
  421 ALIIFWAIPV AVVGSISNID SLTDKVPFLK FIDHVPSWIK GVITGLLPTV LMSVLMALLP 480
  481 IFLRLMAKLG GAPSAAAVEL TTQNFYFAFQ VVQVFLVVTL ASSAASVVTK IIQDPTSAPQ 540
  541 LLATRIPKVS NFYISYIVLQ GLSFSSGALL QITGLILGKI LGKLLDTTPR KMYNRWSSLA 600
  601 GLGWGTVYPP LTLLAVIAVT YSCIAPLVLG FATIGLYLFY FAYRYNMLYV SNADIDTQGK 660
  661 AYARALQHIT VGCYLLVVCL IGLFAIGTAA NRMALGPLIL MIIFLVLMIL YHISLHNALS 720
  721 PLINYLPKNL EAEEQSLLAS NPIKHGDTVG EHPDDITATN AGKNGDGGFP DVDAAEKGLT 780
  781 TTPATPEKKP NLIVKWFRPD KYDGYWQLRR LVPEAHETTQ YPPEVERDAY FHPAITSQPP 840
  841 LLWIPRDKLG VSKQEVKHTA RVIPITDEDA WLDDKNKIHW DVDKGVPPIF EEKIYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle