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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66851071, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFIQRIAKR LPSTPNLPFD DSSREKARNF SRFAFLKRRI RLKGNSSISI PLGFVLLFPC  60
   61 LVIILILLLF VRHPSSPGGI LIPAGTPPSI RRISEKYDKV FATGCLPVEE VPPDYKRANA 120
  121 AFVVLARNKE LEGVVQSLKS IERHFNRWFH YPYVFLNDGD FDDDFKATVK NYTSAPVEFG 180
  181 KIDETMWGFP DWVDHEVARE GIRKQGDAAI MYGGMESYHH MCRFYSGFFY KHPLLMKYEW 240
  241 YWRLEPEIKY FCDITYDPFI MMAEANKTYG FTIAVKELRE TVPNIFRYAS AYMRKNNLKS 300
  301 KGLWEMFLER PEQEEPKPEE EQKKDKLPDE ILLTDPGENT LPEVDPEAME GEKYNMCHFW 360
  361 SNFEIARLDW FRSKEYEDFF EMMDKSGGFW MERWGDAPIH SLAAGALLSP SDIHYFRDFG 420
  421 YRHTTIQHCP ANAPARQLPR IPYLEKTTVD EKARIEEDEY WATFDPVKEN GVGCRCRCDT 480
  481 DIVDVEGKQG SCLAEWVEVA GGWASP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle