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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VAC8_ASPFU
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAIANACLS CLSAVDRWCH ITACLGPIGG RSRDGIYETT LADNEREAVS DLLGYLENRA  60
   61 ETDFFSGEPL RALSTLVYSD NVDLQRSASL TFAEITERDV REVDRDTLEP ILFLLQSSDI 120
  121 EVQRAASAAL GNLAVNAENK VLIVALGGLT PLIRQMMSPN VEVQCNAVGC ITNLATHEDN 180
  181 KAKIARSGAL GPLIRLAKSK DMRVQRNATG ALLNMTHSDD NRQQLVNAGA IPVLVQLLSS 240
  241 PDVDVQYYCT TALSNIAVDA SNRKRLAQTE SRLVQSLVHL MDSSTPKVQC QAALALRNLA 300
  301 SDEKYQLEIV RAKGLPPLLR LLQSSYLPLI LSAVACIRNI SIHPLNESPI IDAGFLKPLV 360
  361 DLLGSTDNEE IQCHAISTLR NLAASSDRNK ELVLQAGAVQ KCKDLVLRVP LSVQSEMTAA 420
  421 IAVLALSDEL KPHLLNLGVF DVLIPLTNSE SIEVQGNSAA ALGNLSSKVG DYSIFVRDWA 480
  481 DPNGGIHGYL KRFLASGDPT FQHIAIWTLL QLLESEDKRL IGYISKSDDI VQMVKTISDK 540
  541 NIESDEEDGE DGEAEVIALA RRCLGLLGNG PKQTLVEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle