YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70996342, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIARQSLL SRHSCLSAFR SPLVNKNVSQ VVAFHASAKK QILPPLPQVI QGTMNDPAPI  60
   61 PKPHPSEGSY HWTFERLVSV GLIPLTIAPF AAGSLNPVMD SVLCALLVLH SHIGFHASII 120
  121 DYFPKRRVPK TKTFLDWLLR AFTVTTAVGL YEFETNDVGI TEAIKRVWKA

Type	Start	End	Confidence
Cytoplasmic	1	71	0.89
Transmembrane Helix	72	93	0.78
Non-Cytoplasmic	94	101	0.71
Transmembrane Helix	102	123	0.77
Cytoplasmic	124	170	0.69