YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159131600
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYSLVFC LLVFEMAVFM GLIIPLPFTV KRKLFTFISE SPLVAKLQYG MKITFIFILI  60
   61 LFIDSVNRVY RVQLELASFT KEGNSMGAAA LGTDRMEVQA RKFYSQRNMY LCGFTLFLSL 120
  121 ILNRTYTMIL EVLRLEDRVK HLEGDKKAGG KDSARLAQAG DIGEIARLRK EIEAKDLDIE 180
  181 TLKKQCEGLT REYHSLGDRV TGTTNDGSKK DL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.43
Transmembrane Helix	7	29	0.92
Non-Cytoplasmic	30	47	0.43
Transmembrane Helix	48	70	0.71
Cytoplasmic	71	108	0.50
Transmembrane Helix	109	128	0.54
Non-Cytoplasmic	129	212	0.62