YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66850304, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFVVPIST QRALIYSRPL SRDIVRELSV LDRVTNKAAE TWAKWEEADK GWKKHLVTWG  60
   61 NKVQQRIPFE EWGLKSIPSL KAQRRLDKSS ETKKVDVLFP GNAIKAEKIR SILRKIATER 120
  121 QDLHRKKMWW SLVAAPLTAP IALIPVYSLC LTDVPNIPFF YLAYRGWSHW RALNGSKHLE 180
  181 YLVEKDLLNP ISFPGLERLY AKRVARVLRD SEKSASSMVE EVGRSEDRLL LDMADAKKLA 240
  241 SILDAPDLAL EAERAIFQVG ESLKAQHQAA KTDQKSATLR EKKT

Type	Start	End	Confidence
Cytoplasmic	1	128	0.80
Transmembrane Helix	129	149	0.78
Non-Cytoplasmic	150	284	0.94