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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70995616, gi|...
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRILSHRL VPLLRTGLLA RHVHNAGART GGLLRSEGGA ALRRRAWPVG ANAIHNVPAV  60
   61 RSISFARILP KLALKMARLP AMFGGAMVAG FAYIQYQATQ AGNYAIDIFK RAGETAGGVA 120
  121 SGFFQELQNV AEQTHRGWQK TTEDIEVPEW LQKILRLDEG SHDGSGGSSG GGSPKESRAG 180
  181 AGVVGVAAGS AFGYSQSDED EVRHARQIAE DDQMMLLTRK MIEIRNILQT VGQSGTLTLP 240
  241 SIVVIGSQSS GKSSVLEAIV GHEFLPKGTN MVTRRPIELT LVNTPNAQSE YGEFPALGLG 300
  301 KITDFSQIQR TLTDLNLAVP ERDCVSDDPI KLTIYSPNVP DLSLIDLPGY IQVAGKDQPP 360
  361 ELKQKIADLC DKYIQPPNVI LAISAADVDL ANSTALRASR RVDPRGERTI GVITKMDLVD 420
  421 PERGFSILSD QKYPLRLGYV GVVSRVPQTT ALFSRGSGNI TSAILKNENA YFSAHPSEFG 480
  481 PQSGVSVGVS TLRGKLMHVL EQTMAASLAG TRDAISQELE EATYEFKVQY NDRPLSAESY 540
  541 LAESLDSFKH SFKAFAESFG RPQVREMLKN ELDQRVMDIL AQRYWNKPIE DLTASMPELD 600
  601 PLSDLPKADA DSQYWRRKLD ASTSSLTKLG IGRLATTVVA NAIQNQVDRL LANSTFANHP 660
  661 YAQKQIMEAC TSILNDRFFS TSDQVENCIK PYKFEIEVED PEWAKGRENV SRVLKEELKA 720
  721 CDAAYRRVEE AVGKKKFKDV MAFVDKVRKG EVVLEGDGAA GAGGFSSALL NKGREGVFLR 780
  781 DRADLIKMRL LAIRSKQCAS KKNKYYCPEV FLDVVADKLT STAVLFLNVE LLSEFYYNFP 840
  841 RELDMRLGRH LSDAEVERFA REDPRVRKHL DVIRKKELLE LALEKIESIR QLDGRSKQRN 900
  901 ADRPLAAKEQ RSRGWNLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle