YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70995313, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKSSVRLSS LADASLFQGG RCLTCQLRNV NRLQPSLRYY ATSKSKTGDD VKPATASKPT  60
   61 TTDKFQFKQN DSPSAPQPGD ADFIPPALDR PIGTVIPPQE GQNTGIDERS LQQRRDDFVN 120
  121 YDKHIERRKE LTRQVAKPYF REWSNMRYHE GKTFKSNPRL FKRDKALYFP NMYGITLASP 180
  181 KQPQNTTSIL RGKVSVVNVF SSVWAESQVA TFTGPKQNPG LWEAMKSGSE LVQKVDINLE 240
  241 ENAMKAWLVR MFMWRMRANL PKEQHERYFL VRKGLTDGLK EAIGMMNSKV GYVYLLDENC 300
  301 RIRWAGSGPA EEGELDGLNN GVRKLIQERR ISLESKLPAE EWAGRNQGES ASPKPRVIMR 360
  361

Type	Start	End	Confidence
Signal Peptide	1	22	0.80
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	360	0.99