YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70994896, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALYTAQRRI GVPRAFLFRR HNMPPHRCLI PAPKANSGPL MERRADRELP SINTEKRRWI  60
   61 KTLPIFVVVV GAAMLGIFNY QKSSSSVVSS TLYALRTSPR AREILGDEIY FAQKIPWISG 120
  121 EMNQLHGRID ISFWVKGTKG QGKMRFRSIR PDRMSFFRTE EWSLETEDGQ VVQLLDHDSD 180
  181 PFSQSN

Type	Start	End	Confidence
Cytoplasmic	1	58	0.98
Transmembrane Helix	59	80	0.90
Non-Cytoplasmic	81	186	0.99