YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70994656, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRRPLMLS SAASMPFLAV SSKTSRVAAS LSRFTASRAS SSSTSALAYK ALHRRSPLPL  60
   61 PVSDASPQWD APTAVSSILY ETPVTPTNPP KRHILNCLVQ NEPGVLSRVS GILAARGFNI 120
  121 DSLVVCNTEV EDLSRMTIVL QGQDGVVEQA RRQLDDLVPV WAVLDYTDSA LVQRELLLAK 180
  181 VSILGPEFFE ELLQHHREIT TPGDALEGQK ENKAGDAQAK KAEFHPRHLP PSQALRHKHE 240
  241 HLDAITRLTH QFGGKVLDIS TNNCIVEVSA KPSRIDSFLK LISPFGILES TRTGLMALPR 300
  301 SPLSSEPSEE LEKEAADVVD ASTLPPG

Type	Start	End	Confidence
Signal Peptide	1	29	0.90
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	327	0.99