YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159125019
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYILEVSSPK YCSCCTSLKL TERFCPRQQL ARLLDRPFFP WKNVLVGFSL GQFILEGFLS  60
   61 FRQYKVLQRT KPPKVLENEV SQKVFDQSQA YGRAKAKFGF ISGLYGQIQN LAFIYGDVLP 120
  121 KLWGLSGLLL ARYFPSRFQG EISQTLLFIF GFNLISTVLS LPVSYYNTFV LEEKFGFNKQ 180
  181 TLKLWVTDML KGQMLGIVLG TPIISAVLKI VQKTGNSFFY YLWLFGVFVQ IFAITIYPIV 240
  241 ILPLFNKLSP LEPGELKTGV ESLARKLKFP LHELYVIDGS KRSAHSNAYF YGLPWKKHIV 300
  301 IYDTLIEKSE TEEVVAVLSH ELGHWSLGHT TKLFAIAQSH MFYIFALFSV FVNNKSLYQS 360
  361 FGFHQEMPIM IGFLLFSDAL APMDAVVKLL MNVLSRKFEF EADAFAVKLG YSEQLAASLL 420
  421 KLQIQNLSTM DADWMYASYH YSHPILTERL KALGWQGGKV TDAKTEDSER PVKAADREL

Type	Start	End	Confidence
Cytoplasmic	1	38	0.73
Transmembrane Helix	39	59	0.50
Non-Cytoplasmic	60	144	0.45
Transmembrane Helix	145	169	0.84
Cytoplasmic	170	188	0.42
Transmembrane Helix	189	211	0.83
Non-Cytoplasmic	212	218	0.45
Transmembrane Helix	219	241	0.92
Cytoplasmic	242	332	0.48
Transmembrane Helix	333	352	0.73
Non-Cytoplasmic	353	368	0.56
Transmembrane Helix	369	387	0.66
Cytoplasmic	388	479	0.62