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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66849681, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNPRGRRTN GSIKTSKGTQ RGTVSNLLSD QPLAARPKVS IVSNDDSQDS SDGGAFTTPS  60
   61 TTESTLKTTI NGTDSTERNM SRKPSSPMAP AFMVSAPGKV IVYGEHAVVH GKAAMAAAIS 120
  121 LRSYLLVTTL SKSQRTITMN FRDIGLDHTW NIDELPWDVF HHPSKKKFYY DLVTSLDPEL 180
  181 VAAIQPHADA VSPDKPEDVR KIHRRSASAF LYLFLSLGSS QNPGAIYTLR STIPIGAGLG 240
  241 SSASVCVCLS AALLLQIRTL AGPHPDQPPD EAEVQIERIN RWAFVGEMCT HGNPSGVDNT 300
  301 VSAGGKAVVF RREDYSKPPT VTPLLNFPEL PLLLVDTRQS RSTAVEVAKV GKLKDEYPVV 360
  361 TDSILEAIDQ VTLAAQQKIQ EISTNGISYR TLEDLGTLIR INHGFLVSLG VSHPRLERIR 420
  421 ELVDYADIGW TKLTGAGGGG CAITLLRPDI KEEAVRELEE KLSAEGFVKY ETTLGGDGIG 480
  481 VLWPAVLRNG TDEEGGEEID QQKFENAVGT EGIERLVGVG VQEKREGWKF WKRSPRFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle