YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159125319
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSEASILS NFLLSPASLP TIISLQQFTE LFPKKLRAHP HIRVLYRELQ QLREQDMDTV  60
   61 NGNIDQEVRQ AETQKAELRK KIMKNGVDGM EENDRREMDM DVQLFGQGVN AASSEYHSIS 120
  121 SLLSAMETAC SNIEHEISQV DQEAANVLTG LSATVGELSD LRYGKMQGPA GSSGEEMVKE 180
  181 AIDGLEHLEQ ACNQLTSISQ TIQVFFWDDF RTSSTEGSRY ILGALSFRKQ DQQSEFGRPL 240
  241 DVEQSDI

Type	Start	End	Confidence
Signal Peptide	1	20	0.59
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	247	0.97