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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70993742, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPNPNSKGG STSPQQHRVG EHWSGTNPVP TISKFMERLR SEEQQQKEYE EAAQTARERQ  60
   61 TDGGASPHQP RKRAKGKTRK VRDPVTGKDM EVEDQDEHSM DTVKDPKLVV PNANLGKPTE 120
  121 VKTDAGQNLS EYKENQDVTA PPDPIAEGTT SDVPIHGEKT NILFHPTPTI SYKPMFDQLE 180
  181 KRATGVCLGL FVGVLFLGHV FGGSLWGLIP LACCTTTGIW LWMKEVIRSG REMEWSSEQL 240
  241 RGQTVSFTTL YVSKEHLLSQ ANQATANLLP ESVEWMNTFL GVVWGLLNPD MLAPIADTIE 300
  301 DIMQASAPSV VENVRIAEID QGNNPIRILS MRALPDEHVQ QLKDNICEEN KKNKDPQEAA 360
  361 AAEEGGSYYN LEASFAYHAK PSGQSASSKA RNMHMQVVFF LGIQGLFGVP FPVFVELIEM 420
  421 VGTIRLRLQM MPEAPFMKEI TYSLVGIPHI KAGCMPMVRH GINVLNLPLI SNFVNYAIGT 480
  481 ACSLFAAPKS MTMDLGMLLK GDDIIKETQA IGVMWVRIHR AIGLSKQDKR GTHGGGSDPY 540
  541 INLSFSKYGK PMYCTRVITD DLNPIWEETA ALLVTPELIK VDENLSVELW DSDRNTADDI 600
  601 VGKIELPIRE MLAHPGRMYP QVSKLQGLNE GSEMPGELHW EVGFFGKPKL RPEMRTDGKR 660
  661 QDLPENLQDI PEFQDEKGTI ITEEEDAITH TPPDPLWPSG ILSVVVHQIV HLQLADIKGT 720
  721 TGSRKGREYE PAKSYGESTE EEGKDLPTSY CKIMLNDELI YRTRAKALSS KPIFNAGTER 780
  781 FVRDWRSSMV TVTVRDQRYR EHDPILGVVQ LKLTDLFQKS SQVTRWYPLD GGVGFGRIRI 840
  841 SLLFRHVETK LPPNMLGWDV GTFHFVSDKL TLQGFNHRAK IKLRTGGSSG KIPRGWCHIE 900
  901 GNNSYYDLTN EDFRRSIRLP VKHRYRSPVV FELHTQGKHG AAGYSILWLQ HLVDNEETEI 960
  961 DLPIWSTKNG SRLTQNYITE ENWKAKEVPG LEDLHEIGRL QLRGLFTPGI DDSHEQYVVD1020
 1021 SNSRETFETW EACMAEGVRP HRVTAEIPAN IEKLHEQSLR AGRDVLKQSH PRERKRWIDK1080
 1081 QGNNWSGAFG DDPAAYLDSK GRKIAEPGRD QPPQDPVNPP PKEIEPTGAA HPSDYEEDSS1140
 1141 ESSSEEDAQQ EQQEQQQQQQ RQPSEPQTIT TKPSEASSSN GPSKRAAKRS EQRQQRGLMQ1200
 1201 WKPARNAVFA RDEAKYAMRK VKHKFTGNLS GREPDIETET GQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle