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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM1_ASPFU
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSRSGRSI FPLLPPYAAH APNPNQGHII ALPPDGLTPY LGLRARLSQV WINRWTILLL  60
   61 LVLVRVLLAA SGLQADMSTA KREALSACTS VESMGSSMAS MPHYLSQGVN ELTATGVEKA 120
  121 VSGLKSMLML TITGVEELVL FIIKVLYQTY LCLFTLAVRG SVHVAVGVIK EAADFLNSTV 180
  181 KEVGDDIGKA VSTFESAFNK FLDGVNTVAS AFGASVPTLD LNSSISTLEN LQLPSSIDQG 240
  241 LDKLNSSLPT FDEVNNFTQT VLRTPFEEVK KLVNESLGTY TFDRSLLPVP AKEQLTFCEG 300
  301 SNGIDSFFDS VTDLVMKARK IFIAILIVAA TLACVPMAWQ EIRRWRSMKE RSQLVRKEAH 360
  361 DPMDVVYIVS RPYTAAAGIK AASRFSNSRR QILVRWAIAY ATTPAALFVL CLGVAGLLSC 420
  421 LCQYLLLQAV EKTVPELSTQ VGAFADKVVD SLQNASAEWA NDANGVIGHM SQDLNENVFG 480
  481 WVNTSTTALN DTLNTFVDKT TGVLNDTFGG TLLYEPLMDV FGCLIGLKVQ GIQKGLTWVH 540
  541 DHAHIDFPLL PNDTFSRGAA ASISSNSSNP SDSFLADAGD QTSNKITEVV IRVVNKVEDG 600
  601 IRTETIISGV IILIWVFIAL IGIVRALTLF WVRDRNRGEG GGARVNHHLS DAGGFIDVPL 660
  661 TAVSNTNTDA RSMPPPAPAP RYEASTSTVV ASRAVPVSST HHEDEKLGFA GERQYGSALK 720
  721 VDGAADLRGS SYVEYDMEKR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle