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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70993622, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYMANTRTI PGPTAILPVG PEKGLDAGSA VPGRITMSLV LPIIGNNYSL INTLISFIII  60
   61 LIFAFIHLFS SSPSFLIFSG SRLVNSSSNT DPAHPPPYKS DIIYFSSLIT HSSPSYVSLT 120
  121 LLYVYILSRL SSIATMPRFD DADFGVEPAP AGARSPRDAR GSASGSLPIP NEAGNTVEIP 180
  181 ATRSSISDAA QFMHNLSLSP SMRDRRGSRN SFGTSLPIPR SPRVSRLSSV RKADAASVSR 240
  241 DILASQVQDM SKEKVAAAKN MAFAFDIDGV LAHGNHAIPE AKEALKMLNG DNELGIKIPY 300
  301 ILLTNGGGKT EASRCEQLSE ILEVPISTDQ FIQSHTPMQA LSEYYETVLV LGGEGQKIRE 360
  361 VAENYGFKNV VHPKDILAWD PTISPWRTFT AEDRAEAKPR DFSKIKFDAI LVFADSRDYA 420
  421 TDMQLIIDLL LAEDGKLLTR AKDPVSSRIP IYFSQGDLLM PTDHKGPPRL TQGCFRIAVE 480
  481 AQYKALTGVD LERVVYGKPE RATYTYADEV LKAWMEQIHN ENRLPKNIYM IGDNPQSDIV 540
  541 GGNMYGWNTC LVRTGVFQGG ENDEHNPANF GVFPNVLEAV KAAVRKELGQ EFKFKWNPKV 600
  601 NPVTHGDGSS AVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle