YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70992583, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNLFKRMRK LKTILNVRVG TGAAILPAAS KATAEFPAIT RLHLTYARKI YGGHQGARHF  60
   61 WRNCLPRLKY YNPGVRMTVK QTDEQEGPAA LTIYFAEQAS KAAALNASKV EDKYAPAPSE 120
  121 TEKTAVIDLK NLDYKEIWNK VKMMTGAEEL QATPEEEAEL KKLEQMRQQS DKDRARVSAI 180
  181 RQAKKDQERM LQEARGEVER LRQS

Type	Start	End	Confidence
Signal Peptide	1	34	0.95
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	204	0.99