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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EXGD_ASPFC
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTHSRSRDR YGGRDSDREA RYDYDYARRR YATDDDDDYD DDELEHDLTE RRYRRDGYRP  60
   61 PRESRARGYY ERDAEGAADE ELLGNERDPG PRASRSYGDD YDARRREHSR AREAPRRSER 120
  121 HRDRDREGRS RRRAYEDDGR HRTRDGRRDR GRESDGEARR SRRREAGRET AARKHRSSDS 180
  181 TNSASHLLSA DALAKLGAQY EKEERRKREI AKDAAKAERK RQKKLAVVGE ETRALRDPPG 240
  241 ESHRDRTKAR VASGAYLEEG RSPEMRVRHR GGGGPAMEAR WRKEGSWGGT MDDSGGGRPF 300
  301 WKRKRWIGLG ALIIILVIVI PVAVVVSKKH DNKSDPADSQ GTSPGKSNLD GLSHDSIPAY 360
  361 AQGTYLDPWT WYDTTDFNVT FTNETVGGLS IMGLNSTWDD SARPNDNVPP LNEPFPYGSQ 420
  421 PIRGVNLGGW LSIEPFIVPS LFDSYSSVSG IIDEWTLSKR LGSSAASTLE KHYATFITEQ 480
  481 DFADIRDAGL DHVRIQYSYW AVATYDDDPY VAKISWRYLL RAIEYCRKYG LRVNLDPHGI 540
  541 PGSQNGWNHS GREGVIGWLN GTDGELNRNR SLAVHDSVSK FFAQDRYKNI VTIYGLVNEP 600
  601 LMLSLSIEDV LDWTTEATKL VQKNGITAYV ALHDGFLNLS KWKSMLKNRP DKMLLDTHQY 660
  661 TIFNTGQIGL NHTAKVNLIC NDWYNMIKEI NSTSTGWGPT ICGEWSQADT DCAKYLNNVG 720
  721 RGTRWEGTFS LTDSTQYCPT ADTGPPCSCA NANADVSKYS ADYKKFLQTY AEAQMSAFET 780
  781 GQGWFYWTWR TESAAQWSYR TAWKNGFMPA KAYAPSFRCG DAVPDFGDLP EYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle