YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66848298, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADALVYHP ALAHYLRFVA TTVGRDKILR TLQYFSRFYA WYLYRTNRPQ SAIDPYNAIK  60
   61 KQFGTTRKIL RIGKFVEHLK AAALAADNKS PIDPVLRYLA IGRQLGYAGY LTLDTITVVD 120
  121 VIGVKKLATA KRLQESAYRS WMAGLACSAI AGVYTLWRLQ EKEKTLDRKE GEGVVEAKKL 180
  181 EKERAAARIQ LISDLCDLTV PISALGLASL DDGIVGIAGT ISSLIGVWAQ WRKTA

Type	Start	End	Confidence
Cytoplasmic	1	136	0.71
Transmembrane Helix	137	157	0.80
Non-Cytoplasmic	158	212	0.70
Transmembrane Helix	213	231	0.76
Cytoplasmic	232	235	0.74