YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70991415, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWIISFWIFP VISAGMWLAM LLAMLGNWAV IGTPIYPSME AGQTIAYISD IGAQGLKPLF  60
   61 ITGSVITVVF LDLSFVSERW LRHSGQLVPN KGWFDKFCAV ASIFFAVAGA LGLILLACYD 120
  121 TLRHPHFHNG FLLMFLVGYL ISAVLICIEY LWLGIFYRSQ HRILFASFVI KLAFVIIEVA 180
  181 LAIAFGICTR RSSGKKNVAA ILEWVIAFIF TGYILSFVVD LLPSVRTRHH IPQGEKRLEM 240
  241 AHEGPNAPHP HRNGASGGYV VEEPLTRDST GPNANFYRGQ RSTGY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.87
Transmembrane Helix	7	31	0.86
Non-Cytoplasmic	32	55	0.85
Transmembrane Helix	56	76	0.91
Cytoplasmic	77	96	0.82
Transmembrane Helix	97	118	0.94
Non-Cytoplasmic	119	130	0.81
Transmembrane Helix	131	153	0.91
Cytoplasmic	154	166	0.70
Transmembrane Helix	167	188	0.91
Non-Cytoplasmic	189	199	0.81
Transmembrane Helix	200	222	0.88
Cytoplasmic	223	285	0.90