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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159124090
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNFGRRLY TSIWDTAHPL LVRELRNSRM TFFFESPSTG NWFRRFLFNT HARKISSLPP  60
   61 RTRHITKRFA SGSFFMLGIS PSPCAVEAGT SCAISPEKFV SQSHLLDRKF VCASLYTWKR 120
  121 GLHTTKDDDG LKSEQSNELL TNDSNTSPSP SRETADSDTR SGTMKSQEEH IEGFTSRHIM 180
  181 NRLPHMSHLH RPTKEELLAA ANGFWSRLKV RFKWFSIRSV RPFNFDEITA LFSWVLLGHV 240
  241 VWIVLGTTTF FSLLIIAINT VLAQETLAGW VGNYLTKSSG VKVVFESAIV PKWKDGVITF 300
  301 KNVFVSRRPG QGTGHVSKGS SKTAAAVAAA AALSGSSSPE PFSDQQSIPD EEDTNYTQFD 360
  361 LSIETVNVTL SFTKWINGKG LLRDVEVKGI RGVVDRRSVH WSDDHLDPKS YRHEHHPGDF 420
  421 EIDSFKMSDV LVTVYQPGNF RPFSVSIFSC DLPQLRKQWL LYDFMSANMM TGSFDNSLFT 480
  481 IHPRQSHSFA SAEMDNKIEA DGKPSTWKKH SRIRIDGLNI DHLNRGVQGP FSWIYEGTVD 540
  541 IVADIMFPAE NDESLAQVMA GLYDRLEATV ISNQYQEPDS RRQPGMDGTA SSDDKRFLVT 600
  601 DLRLQLNNVR AVVPLFNRDL SYINNALIRP IVAYINSRRT FIPIHCRLVK RLADFDGSWT 660
  661 TFDSGLMDDL SAAVYDAFAR DVVDEQARKR RFKKVGFWSL QLAAQAIFMG MAGNIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle