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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159130955
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDVIIRHQA SPLIESALVY QSITIIFGNA HLQSSFRKRN VILAAMMRTR IPGLVPRICQ  60
   61 TPLPWKRPTQ MTRVRYARWS TSHAVTWLET GHIDLKENEG LLFINNIFPS RLQWLLRGPL 120
  121 GGMRSYEAAV KRIDRPHLAA SDTFQIIQRV VPKNLNVQVK EVVPRFREGG AFVKYTRPGD 180
  181 VNDADIEASI KENLKEHPIR PWFNPFQEVQ VCRVIGRPWI EDLYRLPSPR LKVSFHPVSP 240
  241 EASAADLNTE TLYTLFRPYG KIRDIETQPS DGKVTPRYAY VEFSRPKYAG MAKNCMHGFT 300
  301 IPEQEGGGKS GTRLKIKYER KIKLSMIKDW LLNHPRIVIP VLAALLAAIT VTIFDPMRTF 360
  361 FIELKIKSTL QTEENGVMQW IRKQVNKANI IYFGRKGADP RGLTAIWEDR QEDITRLQSW 420
  421 LMENVETFII IHGPRGSGKR ELVLDRALVD YKYKIVIDCK QIQDARGDSA KIARAASQVG 480
  481 YRPVFSWMNS ISSFIDLAAQ GMIGTKAGFS ETLDAQLSNI WQNTATALKK VTLEHRKKND 540
  541 NDSHLTDEEY LEAHPELRPV VVIDNYLHNA SESSVVYDKI TEWAAGLTAG NIAHVIFLTT 600
  601 DVSYAKPLSK ALPNSVFRTI TLGDCSLEVG RKFVMSHLAY ESKDGKTQPR RAEELEDLDA 660
  661 CIEALGGRVT DLEFMAHRIE AGETPRGTSR ARALVTFYAR LLTYAQGAVN RIIEQSASEI 720
  721 LKMFLLTPET IEQSWTHEQA WYLIKRLAES KDGSLSYNEI VLSELFKENG EITLRALEHA 780
  781 ELISIAAVNG CPQRIRPGKP VLRAVFKKVT ENKALSSRMD LAIIAKKINK ENKSIEKYEE 840
  841 ELSLLGSLPR QPRELTDRIQ WLLNKVYSSQ NKIAKYEKES AYLQKILRSE H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle