YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70990964, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISATISGA HAILLATQFC ATGNVVHLPL LHAQFPSYLS LERLLRIILT FLPESIEPQA  60
   61 YTSVLQELVS GSSIGPTEGD VDVSAVQDLP ETVARKRVRK LRLLPLRHPD DEDSEPSDLL 120
  121 TQFLIHRSHR IDSETGLQPL ILDLLLPFYQ RSTTVRTWLI SSILPLLRLN CEYYPSQDEM 180
  181 FSLNTLESMD DATAVNVLLS MTSPRKDKMD IARNLRGLVG AWIYGSNRAK RRRLSEAANQ 240
  241 SAISLSPDNH RPKTTTDSIW QQVNEWLLSH SLVEHDTTVN AFVHWDGPGD VDLGGYEEEN 300
  301 QQPTQDELTE MRTRYGQTGL AVVYANPDTS SSSLEGSMQI VARVAQLLNL QDSLFVLHKD 360
  361 SALPSVTFDA GEIPSTSRVT LLQNALLLSS NPLTLPSVSS VSFLSALLLS LQVLHGMGVS 420
  421 IPCRQAANLC LHSTEDMQLA ELRSTVGSVA KQVTPGRDWK KVRKQLLWLR DWQAKQSEHT 480
  481 VDRPSCHGLF WKVPQDTVET EVLRALLEAK EYQLAVDIYT RSDPAPLDSN QVERTVQDAI 540
  541 FAAYDNASNG NRTRGGMKRA YEILQAFQPH FPTSVTLQQI QALIAATHAL SFYSLTLQHG 600
  601 VPFQPVSIRV HPDPLSLIEK VLDQNPKSYT KLDDLLSIGR NLVEAGLPTG ASESHESHFG 660
  661 ATPTSREDAV VTAERRVMSL AISSALASND FGTAYSYILT RLTPPSLLPT ASPLTNPKVK 720
  721 DDISWRAVYN AGRYRPPIST PEPSLQAQIT QLSQRMELLS LALTIVPYPD LLPEILGAWR 780
  781 RCDEEMNVLR AQENAEEEIW DDKGDSLSRL PGGFGPTDTE QDAFDTRQQH ARRVRAQRHR 840
  841 SHLEDAPMGL FEVARGAALA LQKNAFPLRS AASAATSPDE MTLSRPARDG HEESSPQSQE 900
  901 GRVRKRDMVS NMVTGGLASG IGWVLGAQPV NRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle