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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70990782, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPWRFTHMF ALVNDDIVGH SGEGEHDPDW PVQETKSEDD PFDSAASDFA PRGTSKFQER  60
   61 IRNKLPKPLE LRSSRQRAIL GKLYDACATA LNARVGRSDN ERFLEQFGYV IVASQLLNEH 120
  121 SAPSYTSAAD VLSNSNPVDL PSLSTTFGVQ GAVVTASTSF SIAWLVHWSR SRTGSGFNPR 180
  181 KVGVLLVLVP VLGVLFYAFA RRQWLKYLRH QAVDAAVVFI SNAQSFDSAA SASVVFIQEV 240
  241 ELVSRGYRMA ENADPSTRST PLPPVSRLED QAQTRRCLRL RRTVSECFYS MLKRYLQAQH 300
  301 VLQPLTDNDN LAKYHDIYDV SLEELTEAET ALAERETEDQ YSLRALRTLF GRLYNVRKSI 360
  361 LCCLLALGAD GGGSDIVRWS TAVEQMRDLT QVTGANTRKM TNILNEDDRD MIPPSPLPTA 420
  421 SPNRENLRAQ YRKLNTLTQG IRALHAKMHL IRELSTASEP TDTEELEATL LAQYESIGTD 480
  481 IRGLLQEWEA GKAALVSSID KRSSVDHMSR PPSGLKLPLS PTPSLGGATA VEGSPADALR 540
  541 ALNGDIKPDP SIIQSVDEDE EIFESVVLPS RNKRASLTRE ERIARVKEDR AKQAAARERA 600
  601 DANTSMLKEL EMVIKQRPRT TASKRVTSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle