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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66847805, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCHESGFIQL FPYNNISVYV TFCIIVLRFF EVLRQLVLRY LSPRARQENG RGKHVALYSH  60
   61 ADLAFSIRDS TIPTSFYPTS LEREGRSAEQ PFPTDLNLGH LLDPLLHPQG GSEPGVLDLL 120
  121 LSGLQPPTQP VPTKHLTTNP SVVTSSSPSK ASTSKDTLPL ISSPPVVSTA SSSSTTANEE 180
  181 STSQNTGSAR PDYSSPDGTL SSSLEPAGKT SSSVESQTTS SATSGDPAQQ NQSSTKPVTA 240
  241 AATNMANGQD VFVPVSTGPI PKTIGSRNDH PVPKNGIVNT DTPVETNKFY CGLFLGTQTN 300
  301 NTFTHPYSVA WVKGGGTSQS YGMAISHVES NIVAHGPVNT AIPGSPISYY VNPIGIHSVI 360
  361 LSASELGPST VLTTENPLPF SANAVLRPSA SSSQSITIPV VQGMGFVTGI YSNLQPKIQS 420
  421 GVFFTKMVTA GSPRTGIFKY SLSLKDGTSW LLYATPDDGS DPQLQLASNS EIIGPAGWSG 480
  481 TIQVAKNPAG ASGEKFYDNS SGVYAVEGAV MGSVSESTGT YSLMWAKAGK DAQNTPLLMF 540
  541 ALPHHMESFD ASTQSRATNI TLRTTTKGQA TAVIGEYWTM VEPELPISMG FAPWSVSGGS 600
  601 IDKISPAAQQ VILAAAPTEL QQDMDAQTNL NSMYFSGKAL SKFATLLYTV DKLGGNSTLA 660
  661 AEGLARLKQS FARFIDNRQQ FPLVYDNVWK GVVSSASYAT GDVGADFGNT LYNDHHFHYG 720
  721 YFIHAAAIIG SMDPQWLETS KDWVNMLVRD AGNSAGNDPL FPFSRGFDWF HGHSWAKGLF 780
  781 ESFDGKDEES TSEDAMFAYA LKMWGKTIGD VSMEARGNLM LGILRRSMRN YFLMESNNKN 840
  841 HPANFIANKV TGILFENKVD HTTYFGNNLE YIQGYGLLSP SLIHMLPILP CSAFTRSKQF 900
  901 VKEEWDAMFA SNGPDPAENV VGGWKGVLYA NLALVDPAAS WNFFTQPNFD YSWIDGGASR 960
  961 TWYLAYAAGE FIID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle