YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70990584, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQTRSLDQ LVKGSPAPGS LPESLSRPSG QLNTLQPPFS QDASDPSSPP RSSTPDLLST  60
   61 LPSSPPQIYL NLLILESSLR AQYLALRERR RQNTFFLLLL AAWIAYFAYA LFLRPREDGS 120
  121 GVGGSIYWMV EMGEKVALLG GIVTALLVWG TGQWERGVRW PRRWLAVANR GLRTMNTKIV 180
  181 IIRGPWWQEL LSYLSFLFPF TLPFFPAPTG NFHYIERPSS DKRGSRQHYQ QYYNNVDSES 240
  241 GLVEEDLSPG GDYIRLLLLP KSFSPEFREN WDDYRTEFWE KENERRAQLR QKLRQKERQL 300
  301 ARQEGGWFWW LGLGLGWKAS QRRRLVAATL KSSDGDKHRH HHHHLSSISK HAHDLKSPTR 360
  361 RGPRSESHSR TPSRSTTPVD IDDRPPSRSS ASSRPRRGST TPSSTASEQS MQLRKKKGTK 420
  421 SLSRGLSPLT QAQIREGIYN TSSLSSDDSF LGESRETTQS REASPSSGLT IKLKHLSDDL 480
  481 HQLVSFVHGF QCLDCLSALE DMACSERGRF PHSGINCSNE LLDIGGVAVS EEPLLSSSES 540
  541 DSLDSESSSN VVTFLLLRRS SSRTSLNIAK RRIDSATFAS RSSTRFDKRA FACAVDKRIN 600
  601 VSSVRAVIGD VRRWLPESSS FLKAEYVATI WSAAPFVKTG LILDLEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle