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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159130607
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPSSTPID HSVDSSADPL RSGSQAARDT QPSATPTLSN IDQTDNRGNG EVEVKTPQGT  60
   61 KPGVNPTLGD NKANADVADE LDDFGLPIPV RSKAPCQLED ERPEEDERFH DVKETRLPSP 120
  121 KSETIPSEND KRAASHDVSS ENDKQSTPPP AYSSLDIQDS VHQSSSTHKR HSSLKPSEWS 180
  181 HQRLSENKAV DSESDDESDG EWKDMPALGE FDVYDDYGRL IARGAKEEGD DAVYQGLGGA 240
  241 GKGYTRVQLD EDAQSATSLD QDTSYLFKET AGNSVGVEGE ELRDPLSQLQ ATKDLLTESQ 300
  301 RIAYVGVTRL VIYQMTQDLE KLPTTKASRK AKQKAADAMR KWGQTVMGRI YTHMEIDPAE 360
  361 QIMIEQLAEH GVQPADLVRP LMQNARVKNP MAEELDSPQA SMSSSASRGL KGNSRASFST 420
  421 ESELTSESTP PPPYETHGDD DLPEVRTPSQ MPTSAKIDID LRWTVLCDLF LVLISDSVYD 480
  481 ARSRSLLERV GQSMEVSWLQ IARFEKRVID ALEMQEAAEK ETWDESEHME KRRKMALKRK 540
  541 YMVMGLATVG GGLIIGLSAG LLAPVIGAGL AAGFTTVGIS GTSAFLGGAG GTALIASGAT 600
  601 LTGSTIGLRA SHRRTGAVQT FEYRPLHNNK RVNLIVAISG WMTGKVDDVR LPFSTVDPIM 660
  661 GDIYSVLWEP EMLQSMGATI NILATEALTQ GLQQVLGSTV LMALMASLQL PLVLTKLSYL 720
  721 IDNPWNVSLA RANAAGLILA DSLMDHNLGK RPVTLLGFSL GARVIFSCLK ELADKGASGL 780
  781 VQNVYLFGAP LVANKDEFIK ARSVVSGRFV NGYSSNDWIL GYLFRATSGG IMRVAGIAPV 840
  841 EGIPGLENHD VTNLVNGHMD YRAAIPRLLK EVGWEVLSEE FAEIEDPDPE NHGERQRELI 900
  901 REIDEARKAA EAQPEKKRFG LFKRGKLAEK KGWETYDVKR NDSFPRESTD SNGTGAVLFD 960
  961 IDAIRAELAS EMIEVKQLES TLPPMKLDLN SPSTQSPAAA TPSEHRAPKD GRATPSVPQT1020
 1021 PDENSRGHSA SQKTQSPPPR QEQIHMAFDT SYDNPPQRSH SSFEPASYDL CPTRPALRSS1080
 1081 VTMPTSVGAS ALGAMALEPN AWADHDFGHG EEGEISMTFE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle