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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159130581
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIVFLGSIP FLLGLRSLFS STFSRVSLLV ALLGLLFPLN SLTLYTNLSL SILSFFAYSS  60
   61 FKVSLASSFS QAPSLFFRLG RQPVSSLCAS PLRVHLHLQS SSQQFSTQRI AIMSSSEDDT 120
  121 PLVRANGRSA ATSTDVKMED TPETNGHVEP GVSLRFGPVK SAGDIDMQDA TDANTGVAGK 180
  181 RKARTSVGER KSYAEPESSE DEDQPLSKRR RTSVKHEDPE TDEDVPLALN GRKLPKASET 240
  241 ALGAEESDSD VPIERKLVAQ KKKIQQKAEK DAKASRKSDA SQAAKATAAS KKKQVNGVKS 300
  301 EPVDEKKPAV KKTTKQANAE PAASARNGKT KATPVKKEES TEAEEGEEEE EEYRWWEDPT 360
  361 KGDGTIKWTT LEHNGVVFPP PYEPLPSDVK MKYDGVPVTL HPEAEEVAGF FGSMLNATQH 420
  421 VENPTFQKNF FMDFKEVLEK TGGAKDPKGN KIEIKEFSKC DFRPIFDYYD AKRIEKKNLP 480
  481 PAEKKRLKAE KDAAEAPYMY CLWDGRKQKV GNFRVEPPAL FRGRGEHPKT GRVKARVQPE 540
  541 QITINIGKDA PVPPPPEGHR WKEVKHDQEG TWLAMWQENI NGNYKYVMLA ANSDVKGLSD 600
  601 YKKFEKAREL KKHIDRIRKD YQKALKHELM VERQKATAVY LIDQFALRAG NEKGEDEAET 660
  661 VGCCSLKYEN VTLKPPNKVI FDFLGKDSIR FYDEVEVDPQ VFKNLKIFKK PPKKEGDEIF 720
  721 DRLTTSALNK HLSNYMPGLT AKVFRTYNAS YTMATLLKDM KATGSVAEKV KAYNDANRRV 780
  781 AILCNHKRTV TASHANQMEK MSERIKGLRY QRWRLKQQML DLDPSLKKKK GAKFFEMDED 840
  841 ISMEWVKEHQ AFLLEEQRQK IKKKFEKENE KLAAEGEKEM KASELEHRLE AVKEMENKFM 900
  901 RENKTGKVEV EGKSPSVEKL EAAITKLEQR IETMELQAQD KEDNKEVALG TSKINYIDPR 960
  961 LTVVFSKKFN VPIEKFFSKS LREKFEWAIK SVDENWEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle