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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70990146, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWRLPGART TLPASVALLL LPILVAPQQL QEHDDLPSTL SVPLSPTQRS FDHHPLPTIN  60
   61 VKSNDASALA TMALAGPGRA VRARPAQASS SSAGLAPQLH ARSLQDWEVE DFVLLATVDG 120
  121 SIHARDRRTG AARWALEVPS SPMVESIYHR ANRSSFDRAQ PEDDFLWIVE PSQDGNLYIY 180
  181 SPGPDAGLQK LGLTVKELVE QTPYSGTDPA VTYTARKETT LYTVDARTGN ILQVFSSRGP 240
  241 ITSGHGCRKV DGFDLEAEEC DTPSGTLVLG RVEYAVAIQN TETGDPICTL KYSEWTANNR 300
  301 DMDLQSQYFR TMDQSHIYSM HDGVVLGFDH SRMDRPRYTQ RFSSPVVRVF DVARPINVES 360
  361 PEAATPLVLL SQPLQPPDPD YGSLDDRDAR VFVDCTSAGG WFAMSEETYP LVTGRAKMAQ 420
  421 CYEKDYLRHG QPLTSLPTSQ QRDALAGVHS LNGPRVVRNT PSISGPSPLE LANDTPRELM 480
  481 RSPSELALPP ALRHSTIIRK GWDNAVDIFV TILLLFFGAF IYFNSHNIQE LAKQKLDVKN 540
  541 IIASYAQPPL STPSTPVVES THFKRDSSPS RPISNLTVEV TVPEEQQEGD ATPKPKRDRS 600
  601 AVGPDSTPRV KIREPSRGPD SDDDVEELDQ AASPEKPKKK ARRGRRGGKN HRRGKKPDSE 660
  661 GESKDQADRV VDQVNNLQPQ SRLEPDLQLV RTVSNDIIEM DGVLQIGRLR VFSDVVLGHG 720
  721 SHGTVVYRGS FDGRDVAVKR MLVEFYDIAS HEVGLLQESD DHNNVIRYFC REQAAGFLYI 780
  781 ALELCPASLQ DLIERPGDYP QLVQGGLDMP DILRQIIAGV RYLHSLKIVH RDLKPQNILV 840
  841 AMPRGRTGSR SLRLLISDFG LCKKLDDNQS SFRATTAHAA GTSGWRAPEL LVDDDNRSAI 900
  901 QGGESQHTES SEPAVVDPQT NRRATRAIDI FSLGCVFYYV LTRGSHPFDK NGKFMREANI 960
  961 VKGNFNLDEL QRLGDYAFEA DDLIRSMLSL DPRKRLAPLC SSLAFRLFTD LFPRPDASAV1020
 1021 LMHPFFWNPS DRLSFLCDVS DHFEFEPRDP PSDALLCLES VACRVMGPEM DFLRLLPKDF1080
 1081 KDNLGKQRKY TGSKMLDLLR ALRNKRNHYN DMPAHLKAHI GGLPEGYLNF WTVRFPSLLM1140
 1141 SCHSVIVELR LTKIDRFKRY FTPVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle