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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66847484, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNMKRTFPA IRAGLLVGIS GGVLSKADVR LGDVVVGTRV MQYDLGKVIG DGELQPTAIP  60
   61 KVPHHSLGTA VSALHSIHEL NPSRVPSILR LKLDGHPEYR RPSSPDRLFH ATYEHESTTA 120
  121 GCEGCDQSKL VLRSRRTSDN IMIHYGAIAS GNQVMRSGTT RDNVARKLDV MCFEMEAAGL 180
  181 MDILPCLSIR GICDYSDSHK SKEWQRYAAA TAAAYARELL EELPVAKAHL NLTWMPNPHQ 240
  241 FPLHERRQRL LNSLRFEQMD SRKSTIRTAL AKTCRWFLSH PDYQAWLDPQ NLTRHHGFLW 300
  301 ISGKPGAGKS TIMKFAYSSM RSKSRNKHAI TASFFFNARG EYLEKSILGL YRSLLLQLLE 360
  361 GYPDLQAVLD DPDINSQGQN GCPSLDVLKD LFRSAVSALG QRSFMCFVDA LDECDEQQVV 420
  421 DMVQYFEELA EQSMNKGILL RICFSSRHYP YIVIHRGIRL TLEDQSGHGE DLATYVANRL 480
  481 QIEDPVLLED LQTQLLRKAA GVFMWVVLVI DILNKEYRHN GLALRRRLAE IPSDLSELFK 540
  541 DILRCDNENI EGLLLCILWI LFAKRPLQPK EFYHALWSGL SLEDLADAQI PDVSVPDASD 600
  601 SLDRFKRCVI GSSKGLAEIT KSKQPTVQFI HESVRDFLLK ERGLHELWPD LGFDWESSSH 660
  661 EKLKQCCDSY MNHTLVRAYI SNVLSEAKAD LQTGISKRYL FLEYASQHVL YHANAAAEAV 720
  721 PQDEFLSHFP VSNWISVNNI FEKFKVCEYS QDASLFYILA DKGFPELIRT RLKEDPHIHV 780
  781 PGERYGYPLF AALANSNKDV VAALLNASLS VRNGVDITEG LNHRKDLKQY AYRTPLSWAA 840
  841 QEGRTSIVEL LLQTETPVDD MDAKGRTPLS RASENGHKAV AELLIGNGAD VNAGDNDGWT 900
  901 PLSRASLRGH KVVAKLLIGK GADVNVRDND GWTPLSHASE TGHEEVVRLL INKGSDVNVC 960
  961 DNDGWTPLSR ASLCGHKVVA KLLIGKGADV NVRDNDGWSP LSRASDEGHE EVAKLLIDKG1020
 1021 ADVNVCDKEG WTPLSPKLLT DKGADVNASD KEGWTPLLRA LQKGREKVAK LLIHKGADVN1080
 1081 ASNNYGWIPL LHAIEKGHKK VAKLLISKGA DVNVRHNDGW TPLSRASDEG HEEVAKLLIN1140
 1141 KGADVNVRDK EGWTPLSRAL IHGHEEVAKL LTDKGADVNV RHNDGWTPLS RASDEGHEEV1200
 1201 AKLLIDKGAD VNICDNDGWT PLSRALLCGY KKVAKLLISK GADVNVRHND GWTPLSRASD1260
 1261 EGHEEVAKLL INKGADVNAG DNDGWTPLAR ASLCGHEEVA KLLIDKGADV NICDNNGWTP1320
 1321 LSHASEKGHE EVVRLLIDKG ADVNICDNDG WTPLSRALLC GYKMVAKLLI GKGADVNVRD1380
 1381 NDGWTPLARA SLCGHEEVAK LLIDKGADVN ICDNNGWTPL SHASEKGHEE VVRLLIDKGV1440
 1441 DVNVRDKEGW TPLSRASIRG HEEVAKLLID KGADVNAGDS DGWTPLSRTL LRGHEEVAKL1500
 1501 LIAKGTDVNA NNNNGLTGML SSTAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle