YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_RHOS4
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.28
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEVEHTGL AIHPMDQFIV KKLFCHTEST APMNECTTNI HWYDITNVTM WMAIAVLVIA  60
   61 AILVLGTRRR AIVPSRSQSV AELLYGFIHN MVEEVTGHEG VKYFPYVMTL FLFVLCGNVL 120
  121 GLLPLSFTTT SHMAVTVPLA LMVFVGVTAL GFMKNGPGFL KMFWVTSAPL AIRPVLAVIE 180
  181 VISYFVRPVS HSIRLAGNMM AGHAVIKVIA GFASIVVVSP VVVGAVTAIY ALELLVAVVQ 240
  241 AYVFTILTCV YLRDAVGDAH H

Type	Start	End	Confidence
Non-Cytoplasmic	1	47	0.70
Transmembrane Helix	48	67	0.94
Cytoplasmic	68	102	0.56
Transmembrane Helix	103	127	0.82
Non-Cytoplasmic	128	131	0.43
Transmembrane Helix	132	153	0.89
Cytoplasmic	154	162	0.43
Transmembrane Helix	163	186	0.67
Non-Cytoplasmic	187	202	0.28
Transmembrane Helix	203	227	0.83
Cytoplasmic	228	228	0.17
Transmembrane Helix	229	255	0.69
Non-Cytoplasmic	256	261	0.28