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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70989777, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSNSFLPR YDADENTNQA SSATKIPDST VSPAPAQETT SPATQTAENS KSEPEDGHTA  60
   61 DSSAYSYDGH QGNGSGMYDT NHTTSVTAAP TTEQEPQGTG IKEDGKMFIG GLNWETTDQS 120
  121 LRDYFSQFGE VQECTVMRDS ATGRSRGFGF LTFKDPKTVN TVMVKEHYLD GKIIDPKRAI 180
  181 PRDEQEKTSK IFVGGVSQEA TEQEFKEFFT QFGRVIDATL MIDKDTGRPR GFGFVTFDSE 240
  241 AAVEAALSRP LAICGKPIEV KKAQPRGNLR DEEDRRNRRG RDFRDGGHGG VDGSQQQQGM 300
  301 QGQAGMPAGL TPQMMAQYWQ RMQQYFALMQ QQMAVAAAQG QGMGAMGMGA MNPAMMQQMQ 360
  361 QMQKMQQMQM ANNQQQQPQQ QGSLSPPSQS PTPQMQNMMN PAMMQQMQNQ VQGNNMGAMQ 420
  421 GQMGNNAGNM NMGANYPGAR GGPGYNAQEQ LAFEQQKYEQ QQQQRRAMES RAFSPYQQGG 480
  481 PTSWEGMYDE VPQPNIPTGP QGMNRAGSIG RGTYSFCLVT GITPVNEHLY PLHTANVKLQ 540
  541 EQHHSRLPAP RLPTPQLALK MLESPVRTIV AAVAEAIVVS ILTLVDRIGA RSLSILTCLF 600
  601 AFFLVSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle