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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159129143
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLRQATFVL PKTGQRLRGL VNLRSSHIAT SNDDEERRGL LSGEVSTNRQ DVLSPVWSRF  60
   61 SDVWHWTRDF VTSEPGIGVL KCSLAYLLGS LATFIPVVAA FLGHQDGKHV VATVTVYFHP 120
  121 ARTQGSMYKA LICALLAFLY AAFISLTSMC VSMFFQDTLG MRAVGHAVVL TVFCGGGLGF 180
  181 IGWTKQRFGD PLVNVACSLA SLASITVLTK EGAVQSGDLS FTKVVQVLKM VIMGVTATMA 240
  241 VSFSIFPVSA RKKLRSNLAI VTETLAIMLV LITDSFLSGS EEELQTTEFL NAAESHKKAY 300
  301 AQLDKLVREA KLEHYVAGTE KEYRLEKNLV RWVQDITHNM GGLRSAASLQ FQLLKQAKLA 360
  361 EPQSCRDRKH APNSTDHLPS PTQLPSHGHN TLLESIDDIP EQRLGGEEEA AAEDDHRDSG 420
  421 DHSDPNPARD EGFSAEHTLQ PEDLFALFIS HLGPSMRSLA FTLKEIFKEI PFTPAPDYKV 480
  481 SVNSRFHVSL DRALDLYQES REKALKVIYR QKELLQIQTP EVEADLEEVS ASCGHFSFSL 540
  541 LEFGEQLKDL LRILDELQLE AEERPNGRSW SWLKVWRWRT AQTQNTKPLD SEQPLLGPTV 600
  601 GEGVTPVASI SPFGLEGRQT PPTKRPEKPP AKERLSYRIW KSLGVFRRED TKFAIKVGTG 660
  661 AALYALPAFL EPTRPFYSHW RGEWGLLSYM LVCSMTIGAS NTTGYSRFLG TCLGAICAIT 720
  721 AWYVTDGNVF GLAILGLVMA TWTSYIIVVM GKGPMGRFIM LTYNLSVLYA YSLTQREGSD 780
  781 DQDEGGDSPI ITDITLHRVA AVLSGCIWGI IITRVIWPIS ARKELKNGLS LLWLRMSLIW 840
  841 KRYPLSLLAK RESSTGFMTP REKLEIERFL SRLEALQAAA RAEFELKGPF PDAAYSNILR 900
  901 RTRSMVDAFH AMNLEMIKNV PVSEGELALL SYTAQEREHL SARISHLLSV MASSMKLEYP 960
  961 LMDVLPNIEH ARDRLLARIF HYRKHPQASQ LTTDEDYALL YAYILVTGQL STEIVEIMEE1020
 1021 IGRLFGVLNE DVVKLVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle