YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119498101, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVVAAPPQG HGPSTFDKMK MGALMGSTVG GIMGFIIGTV TIFQYGAGPN GVMRTLGKYM  60
   61 LGSGATFGLF MSIGSVIRTE GPHNDAWLRA RGPPMMLPRQ SPLRPMRQ

Type	Start	End	Confidence
Cytoplasmic	1	20	0.88
Transmembrane Helix	21	43	0.90
Non-Cytoplasmic	44	58	0.69
Transmembrane Helix	59	79	0.89
Cytoplasmic	80	108	0.86