YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66846953, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPQHLADRT PSPGRPLNTY QLSDNPYVHD HLQMPSSDRL AEQPTYSVER IPNSYGHNEA  60
   61 YEQRHHEQYP AYDYAVNPEA HHDAYYTQPY EPTVTPQDDY DLGQYHEQHQ PYQDDQVPIL 120
  121 QPENPFGPDP YSEEYHDDPA AVPTPSPAPI RRWKTVKEVQ LFHGNLVLDC PIAPKLLSQV 180
  181 PHAEPPGRDE FTHMRYSAAT CDPADFYEER FTLRQKLFAK PRHTELFIVI TMYNEDDFLF 240
  241 ARTLIGVFKN IEYMCNRTQS KTWGKDAWKK IVVCVISDGR AKINPRTRAV LAGLGVYQDG 300
  301 IAKQQVNGKD VTAHIYEYTT QVGLELKGTQ VHIKGRSACP VQMIFCLKEK NQKKINSHRW 360
  361 FFQAFGRVLD PNICVLLDAG TKPGRDSIYQ LWKAFDVEPM CGGACGEIKV MLSHGKKLLN 420
  421 PLVAGQNFEY KLSNILDKPL ESAFGFISVL PGAFSAYRYV ALQNDKNGQG PLERYFLGEK 480
  481 MHGANAGIFT ANMYLAEDRI LCFEIVTKRN CRWLLQYVKS STGETDVPDR MAEFILQRRR 540
  541 WLNGSFFAAV YAIAHFYQIW RSDHSFMRKF MLLVEFIYQT INMIFAWFNI GNFFLVFHIL 600
  601 TTYLGDAELL GTTGKVLGVV FEWLYLATLV TCFVLSLGNR PGGSNKFYMT MVYFWIGIMI 660
  661 YLTFAAIFVT VKSIQKEVAD NSFSVGQLFS NSQFFSIFVS LGSTYVMWLL ASLIFLDPWH 720
  721 MFTSFIQYML LTPTYINVLN IYAFCNTHDI TWGTKGDDKA EKLPSANMKP GGKVDVDIPQ 780
  781 DDGDLNAQYE AELAKFAQKP PKETKVISEE ERQADYYKGF RSAVVLAWVF CNFALGAVVL 840
  841 SAAGLDRFNS DKNATDDDRA TIYMAVVLWS VAGLSIFKFI GAMWFLVVRM VCSRIFDFSI 900
  901 LLSHANASHS SEAFDVISLV FSFPCDCTHP ALY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle