YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159128708
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKGIQLGL RAWEFVFSLL VMALIGNIIA MAFAGNPATI NYSMFTATFS IISLFYLVPA  60
   61 SINLNWAIHP IIMIVLDVLN NIFFLTCAIA LAARLECHSC SNDEYTLHNE ITNGAHNRQK 120
  121 RCREAQASVA FLWFAWAGYM ASTIISILMA RSATVDLRSR TGRAPRVARP SMAQV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.89
Transmembrane Helix	12	34	0.89
Non-Cytoplasmic	35	41	0.70
Transmembrane Helix	42	64	0.81
Cytoplasmic	65	70	0.64
Transmembrane Helix	71	93	0.79
Non-Cytoplasmic	94	132	0.79
Transmembrane Helix	133	155	0.86
Cytoplasmic	156	175	0.81