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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70988817, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPGIGGDF QLFSPLESTR RISQGNSLSV DQSSTDVASQ DWTQWMRWDD EQAFPETANA  60
   61 SPSSPFDLAF ISPSASSGRE ASDAMHKDFS PDISLDFKSP SLGFFPGGDL NTNVSPQPDH 120
  121 VGAGSLSVHS NSPLSSIGAS RKRKTGSDDD GSTMTSMFKA KQAPSKKRAH NVIEKRYRAN 180
  181 LNEKIAELRD SVPSLRASYK QANGNSGDDD DDGVTSASKL NKASILSKAT EYIRHLEIRN 240
  241 KRLEEENTAL KIRLRQLDKA ADQIVTSAAS VSSPSDCTVS TESGASSSPS VFSHAEDVPS 300
  301 DHSPTSSHPP EGLIKVPDAW KRMRAAGSNE SPYSQSYIQY KKTDSHSSQS GGGRMRSHLP 360
  361 NKYMLGALAG LMVLEGLGTE KKTESTAKGL LAVPLNLLNR VQLPSEVYSS AAFQYFWSSW 420
  421 HARAISHFLM LAILVVGSAF IVFVYLFNSD PRRQYSASKV APDVTLSSCN FRRQAWLTSI 480
  481 QRVGVPRHRF FHEWYVVTSR CFEYVLRCLL GWKLYSLVTG VTEEDEKGRV KTWDIAIDAQ 540
  541 LAGGDAEISK SRLVLTIFAA GTLPRSPMRM MLKALHCRIL MWRVGEPGSW TFNVSNDVAR 600
  601 SLARYQWDLA RKMNAALPKD HPDSLPSHLA TLLKIDCDDV MIDTIIQRAA NLTWNRPTQE 660
  661 GTDDDEALLD VVEEDPAIQS SLDALAAWWS SHLLQGALLR YFEASSGGPD AKKSRNVFKS 720
  721 KIKLALDVAP QPSAAHTRAL VMMAVFFERD RVANIGSVLA ALPKEKGKNK QNQASNFLDS 780
  781 SLPISVREEI STAVRCAMIA AIFNARATGD TSLPATFTVE KAIHWFNRLP LDPVELTLLE 840
  841 FAAVYHLLHI LASDIDYLAS SDSSAPPSPM SKASDMLSSS SDDGEDGASQ RNNNIIPHPM 900
  901 PNLGRVASEL IYWARNAYNP AFYGFTSNLV KVIETECTSL CQTAGVHVAD YSCVQEEKSK 960
  961 AKQAIDSKRR FAGGNEEASD NLLLSDES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle