YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70987121, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRQITRRI LITSAIAVFV LFVLFIRPQG PPSPAVRAPG HIDKSAPAVT VKDDLLKGEV  60
   61 IMPGLGNETA KAELGRATWK YFHTMLARYP EDPTEEQQET LRSFILLFAR LYPCGECASH 120
  121 FQGHLKKYPP QVSSRNAAAG WGCFIHNEVN TMLGKPEFDC NNIGDFYDCG CAEDEKAAGH 180
  181 KDKSQAASRG VPQKKDHEGD ATTPVEIHKE PSVAPQYFTF QLLTDHRRTT RG

Type	Start	End	Confidence
Signal Peptide	1	35	0.60
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	232	0.99