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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66846617, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVKEAVKES LLGSSEEPRL SQQVKHHFFH HARKDESTGE FYMTEDDFIN AIAPKHEDYH  60
   61 KIKREHYGLL FRVADKRRAG RLTLSDWATF ENLLTKPDAE YEIAFRLFDL DGTGTVKWET 120
  121 FKNIYNMNKS GDSIPFDWNS EWASLYSGRS KARHDMTYPQ FAQMLRGLQG ERIRQAFHIF 180
  181 DKDGDGYIEP EDFQRIILET SKHKLSDYVL ENLPSLCNIS AGTKISYATV RAFQNVMREM 240
  241 DMIDLIVREA TQKSEDGKIT RADFLNEAAR ITRFSLFTPM EADILFHFAG LDAPSGRLSQ 300
  301 KDFAKVIDAS WRVPLAVAGQ AVSTATTTAQ VAAEKTRSVL HSVLESVHHF ALGSLAGAFG 360
  361 AFMVYPIDLV KTRMQNQRST RVGERLYNNS LDCFRKVIRN EGFLGLYSGV LPQLIGVAPE 420
  421 KAIKLTVNDL VRGHFTNKEN GKIWYPYEIL AGGTAGGCQV IFTNPLEIVK IRLQVQGEIA 480
  481 KTVEGAPRRS AMWIVKNLGL VGLYKGASAC LLRDVPFSAI YFPTYAHLKS DVFGESPTQK 540
  541 LGIVQLLTAG AIAGMPAAYL TTPCDVIKTR LQVEARKGDV RYNGLRHCAA TIWRDEGFRA 600
  601 FFKGGPARII RSSPQFGFTL AAYELLQKWL PMPGSHPEVS PTGQVEPGVG LQSAKAPLPY 660
  661 LRSRNALKLL LDLDENIGRV YIPQADKWPK FLQPSKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle