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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66846395, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPTYSSSLL KASTMYVKAF LAFSCCLLKK THAFHRPKSP QPFQPESQAG RTPVDSSAVP  60
   61 TAPAKQHDAA DSQGPSLHCD LWKSAYDQLY QEERDILSEV QATTRRKNND KKRSQTVAVI 120
  121 DDVIQITEEQ YKEYQKKGIK IRRSGGEDFD LRKLSRKILI AALSFKDVVN TVVSFDPTHH 180
  181 AASAWAVISL GLSMTQNRLD LQDALFESSE FLAEVLSGCA YIETTFYQNG PIAKSKIESA 240
  241 TVGIYKAILR YAAEVLTAQN AGVGRKILYS VTPITDQRLM ELRSSVETEW QKLCQLVQFD 300
  301 ALDKGLQNDK RAELYLARID DEVSKVLRVL IQDFSLPVAE GALYNSYANQ GDDTCLPNTR 360
  361 VDLLSEISKW AESCEGKHIF WLNGMAGTGK STIARTVAHS FDEKGKLGAS FFFKRGEADR 420
  421 DNARRLIPTV TKELMKKIPQ LVPGVLAAIE RDPDISSKAL SHQFDALLLH PLQELKLHRN 480
  481 INMVVVLDAL DECVSADIHI LLKLLPQLRK STSIRLRIFL TSRPELPIRR GFKQSGDHQD 540
  541 LVLHELPSPV IEQDIRLFLR VRLSDIRKEN SLPRDWPRDD EMEKLVTLSI PLFIYAATVC 600
  601 RFIGDGKRSP TQRLATVLQS EAAKPSSQME RVYRPVLMQV LGDDPKESHD LVREFRNIVG 660
  661 VIILLATPLS VYTLGQLLST SVEDISYLLD KLHSVLAVPE DINSPVRTLH LSFREFLLNT 720
  721 GEEDLHVNER LTHGEILSHC LGVMKSGLKR NVCGLSSYGT LREDVASQVI DQYIPQALQY 780
  781 SCRYWMYHFE KAGDKEREKD IFPFLKEYFI HWLEAMSLLG LASETVGIIG TLRTKSVTDV 840
  841 EFLKFLQDAY RFVLKHAQMI NMAPLQVYCS GLAFSPTDSI VRRIFNNKQP SWLPVLPQVH 900
  901 KSWSAELQTL EGHSSWVSSV AFSPDGQRIV SGSDDNTIKL WDAQTGSELQ SLQGHSDSVH 960
  961 SVAFSPDGQR IVSGSDDNTI KLWDAQTGSE LRSLEGHSRP VYSVAFSLDG QRIVSGSDDN1020
 1021 TIKLWDAQTG SELRSLEGHS DWVHSVAFSP DGQRIVIYGS KIRLWDAQTG SELQSLQSHS1080
 1081 DYVTYAFLGN FRVEHKQGSH ISVESSWVCF RGERVIWLPP ELREPSCRAI NHDILALGAW1140
 1141 ESWALYFDFH GLEISSHLDF EGFYIKWVFI TSEVVTMSCS RCLRDETSQR SYRANRIFDQ1200
 1201 SCAHYIPLGC PSTFAFNCYS AYRADFRESS RSGYGSIKYP KVGAAGQKND YQMFVGQSDF1260
 1261 ENDCTLTRVY RN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle