YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70985236, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRQSVRRFG TTALRAVEAS TAYHERVSRA QGVVNGLTEA IGNTPLIRLK RLSEETGRNI  60
   61 FGKAEFQNPG GSVKDRAALF VVKDAEEKGL LKPGGTVVEG TAGNTGIGLA HVCRSKGYKL 120
  121 VIYMPNTQSQ GKIDLLRLLG AEVYPVPAVA FDNPQNYNHQ ARRHAESLEN AVWTNQFDNT 180
  181 ANRQAHIETT GPEIWAQTDG KVDAFTCATG TGGTLAGITR YLKTASDGRV KCFLADPPGS 240
  241 VLHSYIQSGG NLIERSGSSI TEGIGQGRVT DNLKPDIDLL DGSLTISDEK SIEMVYRCLD 300
  301 EEGLYLGASS ALNVVAAKEV AEQLPKGSNV VTILCDGAYR YADRLFSNTW LQSKGLRSSI 360
  361 PKHLEKYVVL P

Type	Start	End	Confidence
Signal Peptide	1	19	0.53
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	371	0.99