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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70985214, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTPVLRRLA SMKSRIPLIS GLHLNFISVH YIYIIAMTLI TSIILYPGGD LAYIDILFFC  60
   61 SGAATQSGFN TVDFNKLKTY QQVILYFSSM LTTPIFIHSV LVFIRLYWFE KRFQHIVQDT 120
  121 RAMRSTRTRM RTLSRDKDAT SLGREEAGIG SRPIVVLRNN TQESNERGRE ASAGNPEYGS 180
  181 SPGSSSRFDR ADSSEVQTGG PNGTLGLGLG SLRVPTQLDP EHYIAFLEKQ RKNKGALRIP 240
  241 SPREYDRGGV PEVLEEADDE GEGSKRTRSS ESDDENSRNS EESDQVGPLE GPHITINEPD 300
  301 IQQTRTRNST FPRLDTRPTY RDTKDLNDTS ALERSRSRRP TLSNLVRSLT QERERTTLHY 360
  361 LSWNATVARN SNFVDLTEEQ RDELGGIEYR ALKTLAIVLT SYYLFFHILG MVCLVGWIMT 420
  421 THWGQVVEQI GQGRPWWGIF TAGSAFNDVG FTLTPDSMTS FQTAVFPLLL MTFLIIIGNT 480
  481 GFPCMLRLII WVLSKIVPRE SAVWEELKFL LDHPRRCFTL LFPRNATWWL FAILVALNGI 540
  541 DLIFFIILDL NDPTVTSLSP GIRVLVGLFQ AASTRTAGFG VVSVADLHPA IQVSYMIMMY 600
  601 ISVFPIAISM RRTNVYEERS LGIYAGGEDE DEPQTPPSYI GFHLRRQLSF DLWYVFLGLF 660
  661 IIAIVEGNRL QSEDEYAFQM WAVLFEIVSA YGTVGLSFGY PGVNTSFSGQ FKVLSKLIII 720
  721 AMQIRGRHRG LPYALDRAIL LPSESLKDKD LQDAERRMRR RVSNLSTMSG MDRTYSQART 780
  781 ENGVATGAED KDRGATAWTN GDNVIRRHST MRSQQSQKSQ R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle