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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66845558, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSPRELFA ISTTERICSA ISLAGTSIII ISFLSSRSFR KPINRLVFYA SWGNIMANVA  60
   61 TMISQSGIAY GTSSCLCQFQ AFLIQWFMPA DALWTLAMAC NVYLTFFHKY NSEQLRQLEW 120
  121 KYVLFCYGLP FIPAFVYFFI ETEARGKVYG SAILWCWVSL PWDFLRIAVF YGPVWFVIFL 180
  181 TFAIYLRAGK VIFEKRRQLE EAECPESSGE IDSPMEPAVS KKTEIHVTSE ITHSGSESNR 240
  241 LSIMSASLIP HRYLSPYSPY SVTIEGGSAA GNDEHVPMRT LRSSQHDPYA QHHAMARDVN 300
  301 SAAWAYTKYA MLFFIALLVT WKKNNHIEVK MAEDAQSTNA NHPRQAASPS PPPPAPVPLT 360
  361 PGPRASRLQQ VFGQALARTL RANSYANFSG CFPTPAKHVP ASLESVWRQL NAKLEESAKA 420
  421 EFDDILHERD AVRHLNELDR LVGEARHRRD NGQGESRVAP HTLTPDELYR AHLTPYLQEA 480
  481 QSSLNARIQA TEAENAELAQ HIQSQRAEIE RLLSSLESIV ADIEGAAAAA SHFSKENDLR 540
  541 QEAFKMDEEV KARSEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle