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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70984727, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASDFLSPDS IDPGNGVREV SSNVSKPTKR QRWATQRVAG AGGVRKRVSI MDRLHKRSEA  60
   61 KSEKRGSMLP PTDDSNTESD QDAQGGSNRR VYFNIPIPES ERDEDGQIKT SYPRNKIRTA 120
  121 KYTPLTFIPK NIWFQFHNIA NIYFLFIIIL GFFSIFGVDN PALNTVPLIV IVVATAIKDA 180
  181 IEDWRRTVLD NELNNSPVYR LVEWNNVNST EDKVSLWRRF KKACTRATIS TYRWIRRLMK 240
  241 KNKDVPQMFQ DERRASILTT VTPRASVYSQ RGDHGMEEDA IQMTPVPSPS AEARADWPLP 300
  301 AGDSDQFLHP DKRNRDSLQA VTLPVTPPRK GGSVVDPSKQ TIGKARFKRD YWKNIQVGDF 360
  361 VRLYNGDPIP ADIVVLSTSD PDGACYVETK NLDGETNLKV RQALNCGRQV RHARDCEKAE 420
  421 FLIDSEAPHP NLYAYNGALR WEQRDPDYPD APRREMVEPI TISNMLLRGC SLRNTEWALG 480
  481 VVIFTGDETK VMLNSGVTPS KRAKLAKALN WNVIYNFILL FAMCFVSAVV NGVAWGSDDR 540
  541 SLNYFDFGSY GSTPVVTAII TFWVALILFQ NLVPISLYIS LEIVRTCQAI FIHSDVFMYY 600
  601 EKLGISCVPK SWNISDDVGQ IEYIFSDKTG TLTQNVMDFK KCTINGVSYG EAFTEAQVGM 660
  661 IRREGGDADT VAAEAREKIA ADTTKMLQML RRIHDNPYLR DENLTFIAPD YVADLEGQSG 720
  721 EAQKQATEHF MLALALCHTV ITEQTPGDPP QIEFKAQSPD EAALVSTARD CGFTLLGRSG 780
  781 DDLILNVMGE ERTYTVLNTL EFNSTRKRMS AIIRMPDGTI RLFCKGADSI IYSRLARGKQ 840
  841 QELRKKTAEH LEEFAREGLR TLCVAERVLS EEEYRTWSKE HDIAAAALTD REQKLEQVSS 900
  901 EIEQELMLIG GTAIEDKLQD GVPDTISLLA DAGIKLWVLT GDKVETAINI GFSCNLLTND 960
  961 MELLVFNIPE DQPQRASQEL DEQLQKFGLT GSDEELIAAR EDHRPPPATH AVVIDGDTLK1020
 1021 LMLSDELKQR FLLLCKQCKS VLCCRVSPAQ KAAVVRLVKN GLNIMALSIG DGANDVAMIQ1080
 1081 EADVGVGIVG EEGRQAAMSS DYAIGQFRFL QRLILVHGRW SYRRMGETIA NFFYKNMVWT1140
 1141 IALFWYSLYN DFDGSYLFDY TYIVLVNVAF TSLPVILMGI FDQDVDDKVS LAVPQLYMRG1200
 1201 IERKEWSQTK FWLYMLDGFY QSIICFYMPY LLFSPATFVH SNGLNINDRT RMGVLVASCA1260
 1261 VIASNTYILM NTYRWDWLTV LINVISSLLI FFWTGIYSST TASAQFYKAA AEVYGALSFW1320
 1321 VVLLMTVIIC LLPRFTVKAV QKVFFPRDVD IIREQVTQGK FKYLDQYEAF VPPKAAATSG1380
 1381 GLSNGSAASS DLGKPIQSSM KQDPFSDDQQ IYPPSVAPTI HTHNPRSQNG SNGTNYSFDT1440
 1441 TQHPRPQSVQ SAQRTRHSFD RARPSYDVNS DFNSGAMLSR VDSATGIPVP QSPHSPLKSP1500
 1501 HDPPSYQV

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