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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70984557, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVDKMFSLR TTVRRASTSK PLRALSAPHA VSSARLSSPR HALKASAVPL LQSRSYSRAA  60
   61 DPHLSSTRST VVQLLSNIGS KREVQQYLSH FTSVSSQQFA VIKVGGAIIT EHLQTLSSAL 120
  121 AFLNHVGLYP IVVHGAGPQL NRMLEAAGVE PHFEDGIRVT DGKTLALARK LFLEENLKLI 180
  181 EELERMGVRA RPINAGVFYA DYLDKEKYNL VGKINGVNKK PIESAIEAGC LPILTSMAET 240
  241 PDGQVLNVNA DVAAGELARA LQPLKIVYLA EKGGLFNGDT GEKISVINLD EEYDHLMTQW 300
  301 WVRHGTRLKI KEMKELLNDL PRTSSVAIIH PADLQKELFT DSGAGTLIRR GNKVHTKTSL 360
  361 SEFEDLEKLK DVLVRDREGL DARATVDRYV EGLKERDFKV YYDEPMEALA VVLPPSKDNS 420
  421 SSFPHLATFT ITKSGWLSNV ADNVFAAIKK DFPQLVWTVK ENDENLTWFF DKADGSLSRD 480
  481 GEVLFWYGIE SGEEVKQLVQ EFNQHGRQMF GDINLEARLQ RAAQAATNIG KGFGASGASV 540
  541 EQKRAFSSTA NALRAARFGR PAVSPRVVRS YSTTNPNPPL GEKNMSNNRP SKVALIGARG 600
  601 YTGQALINLL NAHPYMDLRH VSSRELAGKK LQGYDKREII YENLSPEDVK RMSANGDVDC 660
  661 WVMALPNGVC KPFVDAVDQG SETGNVIVDL SADYRFDDKW TYGLPELVNR GKIAQATRIS 720
  721 NPGCYATAAQ IGIAPLVPYL GGQPTVFGVS GYSGAGTKPS PKNDVQNLTN NIIPYSLTDH 780
  781 IHEREISAQL GTSIAFIPHV AVWFQGIHHT ISIPLNQEMT SRDIRNIYQE RYAGEKLVKI 840
  841 IGEAPLVKNI AGRHGIEVGG FAVHSSGKRV VVCATIDNLL KGAATQCLQN MNLALGYGEY 900
  901 EGIPLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle