YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70984092, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADFLALPSF LVENSAAVAL KDAYNSFSER RAALGLSNPG TVDNIAREVQ KEVLLSNFMF  60
   61 SGLRADLTKV FGMSPLFRVS HAFSMGGSGN LPPYAFSAMY GTPKVFMQGN FGSDGALAAV 120
  121 FNYRWNPKLV TKTNTQIMAG ASQGLLQIDN DYTGDDFSAS IKAFNPSCLD GGLTGIFVGS 180
  181 YLQSITPSLA LGFEAIWQRQ AMNTRPETAL SYCARYKAND WIASAQLQAQ GVFTASYWRK 240
  241 LSERVEAGVD MNLQFAPNAA AALMGGPSRD GTTSIGAKYD FRASTFRAQV DSAGKVSCLL 300
  301 EKRIAMPISL TFAGEIDQAK QSAKLGLAVS LEIAGEELME QQEKIEAQGM IPPPF

Type	Start	End	Confidence
Signal Peptide	1	19	0.77
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	355	0.97