YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70982279, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTLYSTSP GTYWEQYEEV SQHSAHLNVV ERLWSAWYAW MQNDVLATGI MSFVMHEIVY  60
   61 FGRSVPWILI DTLGLFKNYK IQNNKIPSLR EQWDCAKFVL LSHFTVELPQ IWLFHPMAQF 120
  121 FGLSTSVPFP SVWTMMYQIA IFFVLEDTWH YFSHRALHWG PLYKAIHKIH HQYSAPFGMA 180
  181 AEYASPIEVM ILGFGTVGCP ILWCALTGDL HIFTMYVWIV LRLFQAIDAH SGYEFPWSLH 240
  241 HFLPFWAGAD HHDLHHEKFV GNYSSSFRWW DYLLDTEYTP EALKRRREGK LTKKAQ

Type	Start	End	Confidence
Cytoplasmic	1	119	0.60
Transmembrane Helix	120	144	0.71
Non-Cytoplasmic	145	186	0.60
Transmembrane Helix	187	213	0.73
Cytoplasmic	214	296	0.65